Gene specific co-regulation discovery from gene microarray data

Zhang, Ji and Liu, Qing and Xu, Kai and de Souza, Paulo (2008) Gene specific co-regulation discovery from gene microarray data. In: 19th International Conference on Genome Informatics (GIW'08), 1-3 Dec 2008, Gold Coast, Australia.

Abstract

[Abstract]: The problem of gene specific co-regulation discovery is to identify, for a particular gene of interest, called target gene, its strongly co-regulated genes and the condition subsets where such strong gene co-regulations are observed. In this paper, we propose an efficient method for finding gene-specific co-regulations using genetic algorithm (GA). Compared with the previous method, our method is anticipated to achieve a notably improved efficiency by using a number of performance boost strategies.


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Item Type: Conference or Workshop Item (Commonwealth Reporting Category E) (Paper)
Refereed: Yes
Item Status: Live Archive
Additional Information: Permanent restricted access to paper due to publisher copyright restrictions.
Depositing User: Dr Ji Zhang
Faculty / Department / School: Historic - Faculty of Sciences - Department of Maths and Computing
Date Deposited: 24 Sep 2009 00:14
Last Modified: 02 Jul 2013 23:23
Uncontrolled Keywords: microarray data, gene co-regulations, genetic algorithms
Fields of Research (FOR2008): 08 Information and Computing Sciences > 0801 Artificial Intelligence and Image Processing > 080109 Pattern Recognition and Data Mining
URI: http://eprints.usq.edu.au/id/eprint/5623

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